Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------MKIGDISIHYLNGGNTKMDGGAMFGVVPKPLWSKQYNANERNQINLPTHPILIQTAQYNLIIDAGIGNGKLSEKQLRNFGVDEESHIIADLANYNLTPKDIDYVLMTHMHFDHAAGLTDQAGHAIFENAIHVVQQDEWHEFIAPNIRSKSTYWDKNKGDYSNKLILFEKH-----------FEPVPGIKMQHSGGHSFGHTIITIESQGDKAVHMGDIFPTTAH--KNPLWVTAYDDYPMQSIREKERMIPYFIQQQYWFLFYHDENYFAVKYSDDGENIDAYILRETLVDNN |
| 1P9E Chain:A ((36-329)) | AAPQVRTSAPGYYRMLLGDFEITALSDGTVALPVDKRLNQPAPKTQSALAKSFQKAPLETSVTGYLVNTGSKLVLVDTGAAGLFGPTL----------GRLAANLKAAGYQPEQVDEIYITHMHPDHVGGLMV-GEQLAFPNAVVRADQKEADFWLSQTNLDKAPDDESKGFFKGAMASLNPYVKAGKFKPFSGNTDLVPGIKALASHGHTPGHTTYVVESQGQKLALLGDLILVAAVQFDDPSVTTQLDSDSKSVAVERKKAFADAAKGGYLIAASHLSFPGIGHIRAEGKGYRFVPVNYSVVN-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P9E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141784 for 2258 contacts (-62.8/contact) +
2D Compatibility (PS) -28320 + (NN) -3895 + (LL) 560
1D Compatibility (HY) 0 + (ID) 2850
Total energy: -176289.0 ( -78.07 by residue)
QMean score : 0.405
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