Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEVKTFYNGNTMPQIGLGTF---RVENDENCMESVKYAIEQGYRSIDTAKVYGNEEQVGAGIRAGLESTGIAREDLFITSKLYFEDFGRENVAAAYEASLSRLGLKYLDLYLVHWPGT------------------NEAVMVDTWKGMEDLYKNNKAKNIGVSNFEPEHLEALLAQVSIK--PVINQVEYHPYLTQHKLKLYLAAQHIVMESWSPLMNAQ-----------ILNDETIKDIAQELGKSPAQVVLRWNVQHGVVIIPKSVTPNRISENFQIFDFELSDEQMTRIDGLNQDKRIGPDPKTFEG |
3UZY Chain:A ((34-328)) | -------DGNSIPIIGLGTYSEPKSTPKGACATSVKVAIDTGYRHIDGAYIYQNEHEVGEAIREKIAEGKVRREDIFYCGKLWATNHVPEMVRPTLERTLRVLQLDYVDLYIIHVPMAFKPGDEIYPRDENGKWLYHKSNLCATWEAMEACKDAGLVKSLGVSNFNRRQLELILNKPGLKHKPVSNQVECHPYFTQPKLLKFCQQHDIVITAYSPLGTSRNPIWVNVSSPPLLKDALLNSLGKRYNKTAAQIVLRFNIQRGVVVIPKSFNLERIKENFQIFDFSLTEEEMKDIEALNKNVRF--------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3UZY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -103807 for 2183 contacts (-47.6/contact) +
2D Compatibility (PS) -28126 + (NN) -11761 + (LL) 496
1D Compatibility (HY) -29200 + (ID) 5550
Total energy: -177948.0 ( -81.52 by residue)
QMean score : 0.447
|
|
|