Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTNKQVEISMAEWDVMNIIWDKKSVSANEIVVEIQKYKEVSDKTIRTLITRLYKKEIIKRYK---SENIYFYSSNIKEDDIKMKTAKTFLNKLYGGDMKSLVLNFAKNEELNNKEIEELRDILNDISKK
3BJ6 Chain:A ((34-143))
---LREGVTVGQRAILEGLSLTPGATAPQLGAAL----QMKRQYISRILQEVQRAGLIERRTNPEHARSHRYWLTPRGEAIITAIRADEM---------AKLALFS--EGFSSVELTAYHKVQLALTR-
General information:
TITO was launched using:
RESULT:
Template:
3BJ6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38959 for 675 contacts (-57.7/contact) +
2D Compatibility (PS) -11417 + (NN) -4549 + (LL) 672
1D Compatibility (HY) -2400 + (ID) 450
Total energy: -57103.0 ( -84.60 by residue)
QMean score : 0.472
(partial model without unconserved sides chains):
PDB file :
Tito_3BJ6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BJ6-query.scw
PDB file :
Tito_Scwrl_3BJ6.pdb
: