Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDFLNDHINVFGLIAALVILVLTIYESSSLIKEMRDSKSQGELMENGHLIDGIGEFANNVPVGWIASFMCVIVWAFWYFFFGYPLSSFSQIGQYNEEVKAHNQKFEAKWKHLGQKELVDMGQGIFLVHCSQCHGITADGLHGSAQNLLRWDKEEGIMDTIKHGSKGMDYPAGEMPAIEMD-EKDAKAIASYVMAELSSVKKT----------KNPQLIDKGKELFESMGCAGCHGNDGKGLQENQ-VF-------------------AADLTTY---------GTESFLRNILTHGKKGNIGRMPSFKYKNFSDLQVKALVEFIKSLKPLED |
| 3HQ9 Chain:A ((169-325)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VTFDNMAKAIEVFEAT-LITPDSPFDQYLKGKKKALDGKQTAGLKLFLDKGCVACHGGLNLGGTGYFPFGVVEGRFAVTNTAKDEYVFRAPSLRNVAITYPYFHSGVVWSLKEAVAVM----GSAQFG---IKLSDDESEAIAAFLGSLTGKQP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HQ9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -17428 for 671 contacts (-26.0/contact) +
2D Compatibility (PS) -11563 + (NN) -8787 + (LL) 12340
1D Compatibility (HY) -800 + (ID) 1200
Total energy: -27438.0 ( -40.89 by residue)
QMean score : 0.383
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