Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNPNLSFYCNECERFESFLKNHYLHLEGFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCSLVGKKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNAILRRNHPTLHAKYDETTAVLIGDALNTYSFELLSNSLL-ESRIIVELVKILSANGGIKGMILGQALDCYFEN-TPLNLEQLTFLHEHKTAKLISASLIMGLVASGINDEELLKWLQAFGLKMGLCFQVLDDIIDVTQDEKESGKTTHLDSAKNSFVNLLGLKKASGYAQTLKTEILNDLNALEPTYLSLQENLNALLNTLFKGKT |
| 3UCA Chain:A ((11-288)) | -----AMNINSLKEEVDQSLKAYFNKDREYNKVLYDSMAYSINVGGKRIRPILMLLSYYIYKSDY------KKILTPAMAIEMIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKILVDYSLEEGKSALKATKIIADAAGSDGMIGGQIVDIINEDKEEISLKELDYMHLKKTGELIKASIMSGAVLAE-ASEGDIKKLEGFGYKLGLAFQIKDDILDVVG---------------NNYITIFGLEECKKKCVNITEECIEILSSIKGNTEPLKVLTMKLLERKF---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UCA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154987 for 2061 contacts (-75.2/contact) +
2D Compatibility (PS) -27681 + (NN) -17564 + (LL) 1040
1D Compatibility (HY) -16800 + (ID) 4400
Total energy: -220392.0 ( -106.93 by residue)
QMean score : 0.478
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