Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQKRVVILLLDSFGIGASEDAKDFGDLGANTLGNIAKACFNNLADSNDRNGVLKLPNLEGLGLGLSALKAANELPLGFQLKPNLIGAYAYAKELSSAKDTISGHWEMMGAPVLFEWGYFKDKNDSFPKEILDEIMHKTKIKGYLGNCHASGTEIIKDLGEKHLETLYPIFYTSADSVFQIAAHEERFGLDHLYALCEEAFQ-ILE-PLKIARVIARPFIGTNRENFKRTANRKDYAIKPHKKLLFETFIEEKQGEVISIGKIADIYAHVGITQKFKAGSLMELCDVTLDQVKNAPNNSLIFTNFVHFDSDYGHRRDVSGYANALEYFDARLKEVLDNLRENDLLILCADHGCDPSFKGTDHTREYIPVLFYHKDLQ--PAFLGKSETFADIGQSIAYFLGLSPLDYGKNLLNFKGQP |
| 3OT9 Chain:A ((9-397)) | -YKRIFLVVMDSVGIGEAPDAEQFGDLGSDTIGHIAEH----------MNG-LQMPNMVKLGLGNIREMKG---IS--KV-EKPLGYYTKMQEKSTGKDTMTGHWEIMGLYIDTPFQVFP---EGFPKELLDELEEKTGR-KIIGNKPASGTEILDELGQEQMETGSLIVYTSADSVLQIAAHEEVVPLDELYKICKIARELTLDEKYMVGRVIARPFVGEPG-NFTRTPNRHDYALKPFGRTVMNELK-DSDYDVIAIGKISDIYDGEGVTESLRTKSNMDGMDKLVDTLNM-DFTGLSFLNLVDFDALFGHRRDPQGYGEALQEYDARLPEVFAKLKEDDLLLITADHGNDPIHPGTDHTREYVPLLAYSPSMKEGGQELPLRQTFADIGATVAENFGVKMPEYGTSFLNEL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OT9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -276222 for 3582 contacts (-77.1/contact) +
2D Compatibility (PS) -40817 + (NN) -10866 + (LL) 844
1D Compatibility (HY) -29600 + (ID) 8700
Total energy: -365361.0 ( -102.00 by residue)
QMean score : 0.532
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