Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHLESIVLRNFRN-YENLELEFSPSVNVFLG-ENAQGKTNLL---EAVLMLALAKSH-------RTTNDKDFIMWEKEEAKMEGRIAKHGQSVPLELAITQKGKRAKVNHLEQKKLSQYVGNLNVVIFAPEDLSLVKGAPGIRRRFLNMEIGQMQPIYLHNLSEYQRILQQRNQYLKMLQMKRKVDPILLDILTEQFADVAINLTKRRADFIQKLEAYAAPIHHQISRGLETLKIE-YKASITLNGDDPE-VWKADLLQKMESIKQREIDRGVTLIGPHRDDSLFYINGQNVQDFGSQGQQRTTALSIKLAEIDLIHEETGEYPVLLLDDVLSELDDYRQSHLLGAIEG------------KVQTFVTTTSTSGIDHETLKQATTFYVEKGTVKKS---- |
| 4O6D Chain:A ((19-377)) | LYFQSNADTGCAIDISRQELRCGSGVFIHNDVEAWMDRYKYYPETPQGLAKIIQKAHKEGVCGLRSVSRLEHQMWEAVKDELNTLLKENGVDLSVVVE-KQEGMYKSAP----KRLTA-TANNTFVVDGPET----KECPTQNRAWNSLEVEDFG----FGLTSTRMFLKVRES----------------------------NTTECDSKIIGTAVKNNLAIHSDLSYWIESRLNDTWKLERAVLGEVKSCTWPETHTLWGDGILESDLIIPVTLAGPR--SNHNRRPGYKTQNQGPWDEGR--------VEIDFDYCPGTTVTL-------SESCGHRGPATRTTTESGKLITDWCCRSCTLPPLRYQTDSGCWYGMEIRPQRH---DEKTLVQSQVNA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4O6D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 73630 for 2251 contacts (32.7/contact) +
2D Compatibility (PS) -32246 + (NN) -5526 + (LL) 6736
1D Compatibility (HY) -3600 + (ID) 2900
Total energy: 36094.0 ( 16.03 by residue)
QMean score : 0.163
|
|
|