Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----------------MQYKIKEMPLEELEP---KVVEGLLEHK----------ERLGYNIPKKDTEYIGFAALSEVGEMVGGVTAKISY------------------GELHVSLLSVDPSTQGSGVGTELMAQIERYGRANSCHHISLTTF--SYQAPEFYRKCGFTELGRVKDFPIKGEEKYFFIKYL
1U6M Chain:A ((2-189))
SLIRSATKEDGQAIARLVLVILKDMELPILEEVSEEQMIDLLAEATAYPTYRYGYQRILVYEHAGEVAGIAVGYPAEDEKIIDEPLREVFKKHGLAEDVRLFIEEETLPNEWYLDTISVDERFRGMGIGSKLLDALPEVAKASGKQALGLNVDFDNPGARKLYASKGFKDVTTMTIS---GHLYNHMQKEV
General information:
TITO was launched using:
RESULT:
Template:
1U6M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47563 for 900 contacts (-52.8/contact) +
2D Compatibility (PS) -14660 + (NN) -1863 + (LL) 128
1D Compatibility (HY) -6800 + (ID) 1300
Total energy: -72058.0 ( -80.06 by residue)
QMean score : 0.436
(partial model without unconserved sides chains):
PDB file :
Tito_1U6M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1U6M-query.scw
PDB file :
Tito_Scwrl_1U6M.pdb
: