Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-KD-INILQKDIFDLT-LSDLSDQNVVVDAYGVSPDE-----AEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLRSHQAEFSWTYISPSAMFEPGERTGDYQIGKDHLLFGSDGNSFISMEDYAIAVLDEIERPNHLNERFTVAGK
3E8X Chain:A ((22-222))
MRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLEE-DFSHAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDPDQ-G-------P-MNMRHYLVAKRLA--DDELKR--SSLDYTIVRPGPLSNEES-TGKVTVS----PHFSEITRSITRHDVAKVIAELVDQQHTIGKTFEVLN-
General information:
TITO was launched using:
RESULT:
Template:
3E8X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93155 for 1584 contacts (-58.8/contact) +
2D Compatibility (PS) -20860 + (NN) -7440 + (LL) 1460
1D Compatibility (HY) -5600 + (ID) 2000
Total energy: -127595.0 ( -80.55 by residue)
QMean score : 0.473
(partial model without unconserved sides chains):
PDB file :
Tito_3E8X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3E8X-query.scw
PDB file :
Tito_Scwrl_3E8X.pdb
: