Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNLKLSEEIKRAINELGYTEATPVQKAVIPVALTGED--IVAKSQTGSGKTAAFAIPIAEQVEWEENKPQ----ALIIVPTRELAMQVKTECTNIGR----FKRVKAAAIYGQSPF--AKQKLELSQKNHIVVGTPGRLLDHIEKGSLNVDK-VAHLVLDEVDEMLSMGFIDQVEDILSRLPKQR-------QNLFFSATMPEEMQDLIKRYQ----------------------DNPMVIEMASEK-TNPIF----HVEMQTDNKEKTLKDVLITENPDSAIIFCNT-KNQVDELTDLLDVKASKIHGGLRQEDRFRAMDDFKSGKSRFLIATDVAGRGIDVDNVSLVINYDLPIEKENYVHRIGRTGRAGKSGKAISFVKTNENPLLRDIEEMLDVTIEKKRKPTVIEVKVNEDAFRKKQQKRPTIKKARGEKLNKNIMKLYFNGGKKKKIRAVDFVGTISKLEGITAEDIGIITIEDHVSFVEILNGKGPAVLEMMRSRKVKGRRLKVNEARKR |
| 3I5Y Chain:A ((79-470)) | -----LDKEIHKAITRMEFPGLTPVQQKTIKPILSSEDHDVIARAKTGTGKTFAFLIPIFQHLINTKFDSQYMVKAVIVAPTRDLALQIEAEVKKIHDMNYGLKKYACVSLVGGTDFRAAMNKMNKLRPN-IVIATPGRLIDVLEKYSNKFFRFVDYKVLDEADRLLEIGFRDDLETISGILNEKNSKSADNIKTLLFSATLDDKVQKLANNIMNKKECLFLDTVDKNEPEAHERIDQSVVI---SEKFANSIFAAVEHIKKQIKERDSNYKAIIFAPTVKFTSFLCSILKNEFKK-----DLPILEFHGKITQNKRTSLVKRFKKDESGILVCTDVGARGMDFPNVHEVLQIGVPSELANYIHRIGRTARSGKEGSSVLFICKDELPFVRELEDAKNIVIAKQEK---------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I5Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134825 for 2812 contacts (-47.9/contact) +
2D Compatibility (PS) -36870 + (NN) -10419 + (LL) 9480
1D Compatibility (HY) -30000 + (ID) 6350
Total energy: -208984.0 ( -74.32 by residue)
QMean score : 0.435
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