Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LTEEVRCIGCGAVIQTEDPDKIGYAPKSSLNNEQVICKRCFRLKHYNEIQDVALTDDDFLRILNQISSKQALIVYVVDIFDFDGSW--LPGLPRFA--GSNPVLLVGNKEDVLPKSLKRDKLTRWMRTRAKEQGLAATDVVLVSAEKGHGFDTLLEKIDELRNGQDVYVVGCTNVGKSTLINRIIKQASGENNVITTSQFPGTTLDKIEIPLADGNVLVDTPGIINHHQMAHFIDTTTLKAITPKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSLVVYVSNNLPIHRTKLEKAEALYEKQAGLVLQPPTEEDMKTLPKLVPYSFTVKEKADIVFSGLGWVTIPEGGAKVTAWVPEGVSATIRTSLV |
1U0L Chain:A ((79-235)) | ---------------------------------------------------------------KPHVANVDQVILVVTVKMPETSTYIIDKFLVLAEKNELETVMVINKMDLYDEDD-LRKVRELEEIYS-----GLYPIVKTSAKTGMGIEELKEYLKG----KISTMAGLSGVGKSSLLNAINPGLKLR-----------TTTTAQLLKFDFGGYVVDTPGFANLE---------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U0L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80998 for 1073 contacts (-75.5/contact) +
2D Compatibility (PS) -15157 + (NN) -4088 + (LL) 15568
1D Compatibility (HY) -6000 + (ID) 1650
Total energy: -92325.0 ( -86.04 by residue)
QMean score : 0.579
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