Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSIEKQVAEQLLEIKAVFLKPNEPFTWASGIKSPIYCDNRLTLGFPKVRQFIAKSLAEKIKQTFGEIDVVAGTATAGIPHAAWVSDLLDLPMVYVRSKAKEHGKGNQIEGPISKGQKVVVIEDLISTGGSSLKAVEALEEAGAEVVGIAAIFTYGLAKGKQLLEESGTKLVTLTNYDELIEVALNENYVTGEDMETLKEWKKNPEKWGK
2AEE Chain:A ((3-210))
MTLASQIATQLLDIKAVYLKPEDPFTWASGIKSPIYTDNRVTLSYPKTRDLIENGFVETIKAHFPEVEVIAGTATAGIPHGAIIADKMTLPFAYIRSKPK----GNQIEGRVLKGQKMVIIEDLISTGGSVLDAAAAASREGADVLGVVAIFTYELPKASQNFKEAGIKLITLSNYTELIAVAKLQGYITNDGLHLLKKFKEDQVNWQ-
General information:
TITO was launched using:
RESULT:
Template:
2AEE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -133461 for 1710 contacts (-78.0/contact) +
2D Compatibility (PS) -22733 + (NN) -11719 + (LL) 104
1D Compatibility (HY) -22000 + (ID) 5750
Total energy: -195559.0 ( -114.36 by residue)
QMean score : 0.638
(partial model without unconserved sides chains):
PDB file :
Tito_2AEE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AEE-query.scw
PDB file :
Tito_Scwrl_2AEE.pdb
: