Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceLPNEVYDVTIIGGGPIGLFSAFYSGLRSMK-TKIIDAEPAVGGKVRYFFPEKIIRDIGGIPA-ITGENLVANLKQQAETFHPTIVCSERVVDVTKLADGTFQLTSHNGSIHFSKTIVIATGSGTFEVNKLEALHAEDFP-FAIHYDVKNIE-QFRDKVVVVSGGGNSAIDWAQTLEPIAKKVHLIYRGEDFKAHEESVRE-LKNSRVEIHIHHEISELIGTNNQLTEITVCCNQTQTTKTIETEALFINHGVKVDLGTMAE----WGFKQAD-FGIVVDDEMKTTVPGIFACGDSATYPRKIRIIAAGLHEGPIAINSAKKYLEPTAADEAMISTHHESFIG
3R9U Chain:A ((1-314))-SNAMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGM-PGGQITSSS---EIENYPGVAQVMDGISFMAPWSEQCMRFGLKH-EMVGVEQILKNSDGSFTIKLEGGKTELAKAVIVCTGS---APKKAGFKGEDEFFGKGVSTCATCDGFFYKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRAAPSTVEKVKKNEKIELITSASVDEVYGDKMGVAGVKVKLK-DGSIRDLNVPGIFTFVGLNVRNEILKQDDSKFLCNMEEGGQVSVDLKMQTSVAGLFAAGDLRKDA--PKQVICAAGDGAVAALSAMAYIESL----------------


General information:
TITO was launched using:
RESULT:

Template: 3R9U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -227953 for 2623 contacts (-86.9/contact) +
2D Compatibility (PS) -32860 + (NN) -8635 + (LL) 2060
1D Compatibility (HY) -12400 + (ID) 3750
Total energy: -283538.0 ( -108.10 by residue)
QMean score : 0.510

(partial model without unconserved sides chains):
PDB file : Tito_3R9U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3R9U-query.scw
PDB file : Tito_Scwrl_3R9U.pdb: