Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LPNEVYDVTIIGGGPIGLFSAFYSGLRSMK-TKIIDAEPAVGGKVRYFFPEKIIRDIGGIPA-ITGENLVANLKQQAETFHPTIVCSERVVDVTKLADGTFQLTSHNGSIHFSKTIVIATGSGTFEVNKLEALHAEDFP-FAIHYDVKNIE-QFRDKVVVVSGGGNSAIDWAQTLEPIAKKVHLIYRGEDFKAHEESVRE-LKNSRVEIHIHHEISELIGTNNQLTEITVCCNQTQTTKTIETEALFINHGVKVDLGTMAE----WGFKQAD-FGIVVDDEMKTTVPGIFACGDSATYPRKIRIIAAGLHEGPIAINSAKKYLEPTAADEAMISTHHESFIG |
3R9U Chain:A ((1-314)) | -SNAMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGM-PGGQITSSS---EIENYPGVAQVMDGISFMAPWSEQCMRFGLKH-EMVGVEQILKNSDGSFTIKLEGGKTELAKAVIVCTGS---APKKAGFKGEDEFFGKGVSTCATCDGFFYKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRAAPSTVEKVKKNEKIELITSASVDEVYGDKMGVAGVKVKLK-DGSIRDLNVPGIFTFVGLNVRNEILKQDDSKFLCNMEEGGQVSVDLKMQTSVAGLFAAGDLRKDA--PKQVICAAGDGAVAALSAMAYIESL---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R9U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -227953 for 2623 contacts (-86.9/contact) +
2D Compatibility (PS) -32860 + (NN) -8635 + (LL) 2060
1D Compatibility (HY) -12400 + (ID) 3750
Total energy: -283538.0 ( -108.10 by residue)
QMean score : 0.510
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