Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LDKTKRKMIYETFMLILILLSLALLPYRNNFTFILNWIIWVIFTLDYLVRLYRADNKWHYVKTHPFQLIAIIPFYGGFRAARIVSFVHLLSITAMGRRYIVPIYSFFRSNGLNRFLMIFVLLV---IIIPVPMVFIEPEINNYPDALWWAIVTATTVGYGDIVPVTPIGRILASIMMLFGIAFIGMITSTITNFFRAKKPTNSSTQRANKITQLISETPDLTKEEIAVVEQFLTLRKKELADENTKSDSE |
| 3F5W Chain:C ((10-94)) | --------------------------------------------------------------------------------------------------------------GAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLYPVTLWGRCVAVVVMVAGITSFGLVTAALATWF------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3F5W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81843 for 549 contacts (-149.1/contact) +
2D Compatibility (PS) -8485 + (NN) -1587 + (LL) 14600
1D Compatibility (HY) -9600 + (ID) 1600
Total energy: -88515.0 ( -161.23 by residue)
QMean score : 0.233
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