Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LTKTLQDRMILPGNGTIPYIGLGVFQVTEQEFIAGAVEKAIEVGYRLFDTAAVYNNEAIVGQAI----ASSAVSREELFISSKVWNGDLGYDETLFAFERTLRNLKLDYLDLYLIHWPV---AGK-----------------YRDSWRAMERLHDEKLIKSIGVANFKQHHLSDLL--VAANEKPVLNQVETHPLLPQNDLRKYLVEQNIAHAAWSPLAKG----------ILMQNPVITEIAKKHQASVDQVILQWHLNRNTIIFPKSITSSRIEENSRLSYFQLDASDMEKIDRLE-----TGKRVGPDPDDLEYFLSSIERERAYLASENEE |
| 3O3R Chain:B ((10-312)) | -------------KAKMPLVGLGTWKSPPGQ-VKEAVKAAIDAGYRHFDCAYVYQNESEVGEAIQEKIKEKAVRREDLFIVSKLWSTFFEKSLMKEAFQKTLSDLKLDYLDLYLIHWPQGLQAGKEFLPKDSQGKVLMSKSTFLDAWEGMEELVDQGLVKALGVSNFNHFQIERLLNKPGLKHKPVTNQVECHPYLTQEKLIQYCHSKGIAVIAYSPLGSPDRPYAKPEDPVVLEIPKIKEIAAKHKKTIAQVLIRFHVQRNVAVIPKSVTLSHIKENIQVFDFQLSEEDMAAILSLNRNWRACGLFVTSDEEDFPF------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3O3R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130025 for 2157 contacts (-60.3/contact) +
2D Compatibility (PS) -27865 + (NN) -10125 + (LL) 2696
1D Compatibility (HY) -25200 + (ID) 5850
Total energy: -196369.0 ( -91.04 by residue)
QMean score : 0.411
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