Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LRTAQKKGEDFVVFFFTPMCGSCQ-IASRLVDVVIEADGIQTEVAKVNLNYVPDIAQSLEITSVPALVKFKNGQPADLSYQLHDATAIFEFLYSE
4AJ6 Chain:B ((24-87))
-----------VIDFYATWCGPCKMIAPKLEELSQSMSDVV--FLKVDVDECEDIAQDNQIACMPTFLFMKNGQKLD------------------
General information:
TITO was launched using:
RESULT:
Template:
4AJ6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63728 for 363 contacts (-175.6/contact) +
2D Compatibility (PS) -6502 + (NN) 8 + (LL) 2624
1D Compatibility (HY) -6000 + (ID) 1050
Total energy: -74648.0 ( -205.64 by residue)
QMean score : 0.679
(partial model without unconserved sides chains):
PDB file :
Tito_4AJ6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4AJ6-query.scw
PDB file :
Tito_Scwrl_4AJ6.pdb
: