Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSNTKFPDGFMWGGATAANQFEGGYNLGGKGLACADLFTGGTHTEPRRITAQLEESTFYPSHEAVDFYHHYKEDIKLMAEAGFKVFRMSINWTRIFPTGKEAEPNEEGLQFYEDVFNELKKHQIEPLVTIAHFDIPLALTNEVNGWASRDLIDYYLHFCEVIFKRYKHLVKHWLTFNEINTATMEIGNYLSLGIRHAEGDFLHQKDDPKVRYQALHHQFVASAKAVKLGHSINPDFMIGCMIAYMPRYPRTCEPSDVLLAKQTEAMHSH--FCGDVHVKGYYPFYAKTFFKDNGIELEFDPE---DEQILREGTVDFYTFSYYLTLCASNDPAYKNSGKSVIGGAENPYLKTNDWGMQTDPVGLRIALNDLYTRYNIP-LMVVENGLGAFDKLEDDGTINDPYRIDYFKEHILQMHKAIQDGVDLIGFTIWGCIDLVSASTGEMAKRYGIIYVDKYDDGTGDYSRKK---KASYYWYKDVISSNGEIGLEE |
2CBV Chain:B ((27-465)) | ----KFPEGFLWGVATASYQIEGSPLADGAGMSIWHTFSHTPGNVKNGDTGDV----------ACDHYNRWKEDIEIIEKLGVKAYRFSISWPRILPEGT-GRVNQKGLDFYNRIIDTLLEKGITPFVTIYHWDLPFALQLK-GGWANREIADWFAEYSRVLFENFGDRVKNWITLNEPWVVAI-VGHLYGV---HAPG-----MRDIYVAFRAVHNLLRAHARAVKVFRETVKDGKIGIVFNNGYFEPASEKEEDIRAVRFMHQFNNYPLFLNPIY-RGDYPELVLEFAR------EYLPENYKDDMSEIQEKIDFVGLNYYSGHLVKFDP----DAPAKVSFVERDLPKTAM-GWEIVPEGIYWILKKVKEEYNPPEVYITENGAAFDDVVSEDGRVHDQNRIDYLKAHIGQAWKAIQEGVPLKGYFVWSLLDNFEWAEG-YSKRFGIVYV--------DYSTQKRIVKDSGYWYSNVVKNNG------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CBV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -247574 for 3824 contacts (-64.7/contact) +
2D Compatibility (PS) -45149 + (NN) -15504 + (LL) 2500
1D Compatibility (HY) -30400 + (ID) 7450
Total energy: -343577.0 ( -89.85 by residue)
QMean score : 0.534
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