Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LASTIYDIAKHAGVSKSTVSRVLNNQAN-ISEESRKKVLAAIDQLNYQPSKLARALTSSGFDAIMVISNRSTTTTTGNPFFSEIIQSISTQAELENFDLILQTAKNSEDELKKCLSKIQEKMIKGIIMLSSPADEDFFHQLDPYNIPIVVTGKVEGHYKNIYSVDTDNFGDSYALTKHLIKQGHQKIACIHAPLDYHVSIDRLAGFRSCLFDHQLDLRNDWIIDSGYSIEDSYKAALRLMEGPDKPTAVFATDDLKVLSIYKMAADKNLQIPTDFSVIGYNDKVASSFLSPPLTSIDIPINKLGKKATNLLFRLIHQDKNVPKTTIIQTEMIERESIQKINA |
1QPZ Chain:A ((1-57)) | --ATIKDVAKRANVSTTTVSHVINKTR-FVAEETRNAVWAAIKELHYSPSAVARSLKVNH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QPZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22625 for 345 contacts (-65.6/contact) +
2D Compatibility (PS) -6265 + (NN) -3205 + (LL) 18936
1D Compatibility (HY) -5200 + (ID) 1350
Total energy: -19709.0 ( -57.13 by residue)
QMean score : 0.769
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