Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MILLESYEEIAAYID--STKKVVFFFTADWCPDCQFIYPVMPSIEKDFSDFVFVRVNRDDYIELAQQWNIFGIPSFVVVENGQELGRLVNKNRKTKAEITKFLAEINHK
3QFA Chain:C ((16-115))
---IESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASECEVKSMPTFQFFKKGQKVGEFSG--A-NKEKLEATINELV--
General information:
TITO was launched using:
RESULT:
Template:
3QFA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86113 for 703 contacts (-122.5/contact) +
2D Compatibility (PS) -10849 + (NN) -3477 + (LL) 600
1D Compatibility (HY) -9200 + (ID) 1300
Total energy: -110339.0 ( -156.95 by residue)
QMean score : 0.620
(partial model without unconserved sides chains):
PDB file :
Tito_3QFA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QFA-query.scw
PDB file :
Tito_Scwrl_3QFA.pdb
: