Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRIKDYADSLGVSSQSIYKRIRSPKYKERLKGHLYRDNQKVENLDLIGIKILEDYHFENDVIELEKTLGDIQEEFEQEKKGMQYRIDRLADKLTPLLEDNQNLVQKNYELLNYVRSLERQKLLLIIALAVMVITLLVAIWLAIF |
2XVQ Chain:A ((372-409)) | ---------------------------------------------------------------------------------------KVFDEFKPLVEEPQNLIKQNCELFEQLGEYKFQNALLVRYTKKVPQVSTPTLVEVSR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XVQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3241 for 159 contacts (20.4/contact) +
2D Compatibility (PS) -4034 + (NN) -1797 + (LL) 6228
1D Compatibility (HY) -4800 + (ID) 650
Total energy: -1812.0 ( -11.40 by residue)
QMean score : 0.512
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