Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKEKYDRSKPHVNIGTIGHVDHGKTTL-------TAAITTVLARRLPTSVNQPKDY---ASIDAAPEERERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMPQTREHILLSRQVGVKHLIVFMNKVDLVD-DEELLELVEMEIRDLLSEYDFPGDDLPVIQGSALKALEGDEKYEDIIM----ELMSTVDEYIPEPERDTDKPLLLPVEDVFSITGRGTVASGRIDRGTVRVNDEVEIVGIKEDIQKAV---VTGVEMFRKQLDEGLAGDNVGVLLRGVQRDEIERGQVLAK----PGSINPHTKFKGEVYILSKEEGGR--HTPFFNNYRPQFYFRTTDVTGSIELPAGT------EMVMPGDNVTIEVELIHPIAVE------QGTTFSIREGGRTVGSGIVSEIEA |
3WY9 Chain:B ((5-425)) | ---------KPHVNIVFIGHVDHGKSTTIGRLLYDTGNIPETIIKKFE-------SFKFAWVMDRLKEERERGITIDVAHTKFETPHRYITIIDAPGHRDFVKNMITGASQADAAVLVVAATDGVMPQTKEHAFLARTLGIKHIIVTINKMDMVNYDQKVFEKVKAQVEKLLKTLGY--KDFPVIPTSAWNGDNVVKKSDKMPWYNGPTLIEALDQ-IPEPEKPIDKPLRIPIQDVYSIKGVGTVPVGRVETGKLKVGDVVIFEPASTIFHKPIQGEVKSIEMHHEPLQEALPGDNIGFNVRGVSKNDIKRGDVAGHTDKPPTVVRTKDTFKAQIIVLNHPTAITVGYSPVLHAHTAQIPVRFEQILAKVDPRTGNIVEENPQFIKTGDSAIVVLRPMKPVVLEPVKEIPQLGRFAIRDMGMTIAAGMVISIQK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WY9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148659 for 3074 contacts (-48.4/contact) +
2D Compatibility (PS) -40501 + (NN) -11049 + (LL) 632
1D Compatibility (HY) -31600 + (ID) 7550
Total energy: -238727.0 ( -77.66 by residue)
QMean score : 0.444
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