Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSISDIAKKAGVAKSTVSRVINHHPHVSDETRQKVMALITELDYIPNQLARDLSRGKTQKIGVVIPHTRHPYFTQLINGLLDAAKTTDYQLVMMPSDYNQELELSYLKQLKMEAIDALIFTSRAISLDIIETYAKYGRIVVCEKLQEYNHLSSAYLDRYSSFLEAFSDMKLRGLEHLVLLFSRNNESSATYQSALLAYQEVYGQLSSPYM-V-VGNVHDFNDGLNLSYQLV-KEVSIDGILATSDEVAAGLIKGYEESRKKCP---YIIGQECLLVGQL--LKLPTIDHKSYYLGKLAFKQALAEKI--SQEVLFSEFLSQDN |
| 3C3K Chain:A ((7-276)) | ---------------------------------------------------------KTGMLLVMVSNIANPFCAAVVKGIEKTAEKNGYRILLCNTESDLARSRSCLTLLSGKMVDGVITMDALSELPELQNIIGAFPWVQCAEYDPLSTVSSVSIDDVAASEYVVDQLVKSGKKRIALINHDLA--YQYAQHRESGYLNRLKFHGLDYSRISYAENLDYMAGKLATFSLLKSAVKPDAIFAISDVLAAGAIQALTESGLSIPQDVAVVGFDGVDISQITVPALTTVQQPSEQIGMKAVSLLLEQIHSDVHHLLPWKFVRRQS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C3K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153651 for 2272 contacts (-67.6/contact) +
2D Compatibility (PS) -27713 + (NN) -11550 + (LL) 4176
1D Compatibility (HY) -11600 + (ID) 2450
Total energy: -202788.0 ( -89.26 by residue)
QMean score : 0.517
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