Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MYHIEL-KKEALLPRERLVDLGADRLSNQELLAILLRTGIKEKPVLEISTQI-LENISSLADFGQL----SLQELQSIKGIGQVKSVE--IKAMLELAKRIHKAEYDRKEQILSSEQLARKMMLELGDKKQEHLVAIYMDTQNRIIEQRTIFIGTVRRSVAEPREILHYACKNMATSLIIIHNHPSGSPNPSESDLSFTKKIKRSCDHLGIVCLDHIIVGKNKYYSFRE--EADIL------ |
| 4PCA Chain:A ((6-226)) | HHHMRNVSLSKQDEYLNKLFAVDTEGALKAHKTAPSELRMAQLGTVEGQMLQLLIRMAGIHSIVEVGTCVGFSAICMAHALPSKGHIYTIEKDYENVVTANQNIVNCKLEDKITVLHGE--ALAQLNTLKEMAP--FDMIFIDA-----------------NKSSYLAYLNWAKMYIRKGGLIVADNTFL--FGSVFDEHPTEKVS-SNAHASMRAFNDELANKEKYLSTIIPTSEGMMVSIKLT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PCA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -26721 for 1552 contacts (-17.2/contact) +
2D Compatibility (PS) -21218 + (NN) -9028 + (LL) 2112
1D Compatibility (HY) -7600 + (ID) 1700
Total energy: -64155.0 ( -41.34 by residue)
QMean score : 0.268
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