Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTVNLDWDNLGFAYRKLPFRYISHFKD-GKWDDGKLTDDATLHISESSPALHYGQQAFEGLKAYRTKDGSIQLFRPDQNAERLQRTADRLLMPHVPTDKFIAAVKSVVRANEEFVPPYGTGATLYIRPLLIGVGDIIGVKPAEEYIFTVFAMPVGSYFKGGLTPTNFIVSKEYDRAAPNGTGAAKVGGNYAASLLPGKYAHEKQFSDVIYLDP--ATHTKIEEVGAANFFGITK----DNQFITPL-SPSILPSITKYSLLYLAKERFGMEAIEGDVFVDELDK------FTEAGACGTAAVISPIGGIQNGD-DFHVFYSETEVGPATRKLYDELVGIQFGDVEAPEGWIYKVD |
| 3DTG Chain:A ((30-371)) | ------LANPGFGKYYTDHMVSIDYTVDEGWHNAQVIPYGPIQLDPSAIVLHYGQEIFEGLKAYRWADGSIVSFRPEANAARLQSSARRLAIPELPEEVFIESLRQLIAVDEKWVPPAGGEESLYLRPFVIATEPGLGVRPSNEYRYLLIASPAGAYFKGGIKPVSVWLSHEYVRASPGGTGAAKFGGNYAASLLAQAQAAEMGCDQVVWLDAIER--RYVEEMGGMNLFFVFGSGGSAR-LVTPELSGSLLPGITRDSLLQLATDAGF-AVEERKIDVDEWQKKAGAGEITEVFACGTAAVITPVSHVKHHDGEFTI-AD-GQPGEITMALRDTLTGIQRGTFADTHGWMARLN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DTG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141401 for 2736 contacts (-51.7/contact) +
2D Compatibility (PS) -34765 + (NN) -10380 + (LL) 1132
1D Compatibility (HY) -23600 + (ID) 6700
Total energy: -215714.0 ( -78.84 by residue)
QMean score : 0.499
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