Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKTYHFIGIKGSGMSALALMLHQMGHNVQGSDVDKYYFTQRGLEQAGVTIL-PFSPNNISEDLEIIAGNAFRPDNNEELAYVIEKGYHFKRYHEFLGDFMR--QFTSLGVAGAHGKTSTTGLLAHVLKNIT--DTSFLIGDGTGRGSA----NANYFVFEADEYERHFMPYHPEYSIITNIDFDHPDYFT-GLEDVFNAFNDYAKQVQKGLFIYGEDSKLHEITSKAPIYYYGFEDSNDFIAKDITRTVNGSDFKVFYNQEEIGQFHVPAYGKHNILNATAVIANLYIMGIDMALVAEHLKTFSGVKRRFTEKII---DDTVIIDDFAHHPTEIIATLDAARQKYPSKEIVAIFQPHTFTRTIALLDDFAHALSQADSVYLAQIYGSAREVDNGEVKVEDLAAKI-------VKHSDLVTVENVSPLLNHDNAVYVFMGAGDIQLYERSFEELLANLTKNTQ |
| 1J6U Chain:A ((0-446)) | -HMKIHFVGIGGIGMSAVALHEFSNGNDVYGSNIEETERT-AYLRKLGIPIFVPHSADNWYDPDLVIKTPAVR-DDNPEIVRARMERVPIENRLHYFRDTLKREKKEEFAVTGTDGKTTTTAMVAHVLKHLRKSPTVFLGGIMDSLEHGNYEKGNGPVVYELDESEEFFSEFSPNYLIITNARGDHLENYGNSLTRYRSAFEKISRNT-DLVVTFAEDELTSHLG----DVTFGVKK-GTYTLEMRSASRAEQKAMVEKNGKRYLELKLKVPGFHNVLNALAVIALFDSLGYDLAPVLEALEEFRGVHRRFSIAFHDPETNIYVIDDYAHTPDEIRNLLQTAKEVFENEKIVVIFQPHR--------GNFAKALQLADEVVVTEVYD----------SGKMIWDSLKSLGKEAYFVEKLPELEKVI--SVSENTVFLFVGAGDIIYSSRRFVERYQSSK---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1J6U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 19740 for 3384 contacts (5.8/contact) +
2D Compatibility (PS) -40046 + (NN) 14361 + (LL) 2388
1D Compatibility (HY) 22800 + (ID) 1050
Total energy: 18193.0 ( 5.38 by residue)
QMean score : 0.059
|
|
|