Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNRLSWEDYFMANAELISKRST---CDRAFVGAVLVKNNRIIATGYNGGVSETDNCNEVGHYMEDGHCIRTVHAEMNALIQCAKEGISTNNTEIYVTHFPCI------NCTKALLQAGVKKITYKANYRPHP----FAIELMEAKGVAYVQHDVPEVTLGMEE
2B3Z Chain:A ((13-144))
-----MEEYYMKLALDLAKQGEGQTESNPLVGAVVVKDGQIVGMGAHLKY-------------------GEAHAEVHAIHMAGA---HAEGADIYVTLEPCSHYGKTPPCAELIINSGIKRVFVAMRDPNPLVAGRGI-SMMKEAGIEVREGILADQAERLNE
General information:
TITO was launched using:
RESULT:
Template:
2B3Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73220 for 1005 contacts (-72.9/contact) +
2D Compatibility (PS) -13677 + (NN) -11637 + (LL) 1292
1D Compatibility (HY) -6800 + (ID) 1400
Total energy: -105442.0 ( -104.92 by residue)
QMean score : 0.433
(partial model without unconserved sides chains):
PDB file :
Tito_2B3Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B3Z-query.scw
PDB file :
Tito_Scwrl_2B3Z.pdb
: