Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRILEKAPAKI-NLSLDVTRKRPDGYHEVEMIMTTIDLADRIELTELAEDEVRVSSHNRFVP-DDQRNLAYQAAKLIKDRYNVKKGVSIMITKVIPVAAGLAGGSSDAAATLRGLNRLWNLNLSAETLAELGAEIGSDV---------SFCVYGGTALATGRGEK----IKHISTPPH-----CWVILAKPTIGVSTAEVYRALKL--------DGIEHPDVQGMIEAIEEKSFQKMCSRLG--NVLESVTLDMHPEV----------AMIKNQMKRFGADAVLMSGSGPTVFGLVQYESKVQRIYNGLRGFCDQVYAVRMIGEQNALD-------------- |
1H72 Chain:C ((1-296)) | MKVRVKAPCTSANLGVGFD--------VFGLCLK--EPYDVIEVEAIDDKEIIIEVDDKNIPTDPDKNVAGIVAKKMIDDFNIGKGVKITIKKGVKAGSGLGSSAASSAGTAYAINELFKLNLDKLKLVDYASYGELASSGAKHADNVAPAIFGGFTMVTNY---EPLEVLHIPI--DFKLDILIAIPN---ISINTKEAREI--LPKAVGLKDLVNNVGKACGMVYALYNKDKSLFGRYMMSDKVIEPVRGK-----LIPNYFKIKEEVKDK------VYGITISGSGPSIIAFPK-EEFIDEVENILRDYYE---------------NTIRTEVGKGVEVV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1H72.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136181 for 2017 contacts (-67.5/contact) +
2D Compatibility (PS) -25692 + (NN) -2573 + (LL) 2620
1D Compatibility (HY) -13600 + (ID) 3000
Total energy: -178426.0 ( -88.46 by residue)
QMean score : 0.432
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