Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEHYYSEKPSVKSNKQTWSFRLRNKDFTFTSDSGVFSKKEVDFGSRLLIDSFEEPEVEG-GILDVGCGYGPIGLSLASDFKDRTIHMIDVNERAVELSNENAEQNGITNVKIYQSDLFSNVDSAQTFASILTNPPIRA------------GKKVVHAIFEKSAEHLKASGELWIVIQKKQGAPSAIEKLEELFDEVSVVQKKKG----YYIIKAKKV
3Q87 Chain:B ((1-164))
------------------------------------MDWYEPGEDTYTLMDALEREGLEMKIVLDLGTSTGVITEQLR---KRNTVVSTDLNIRALESHRGG---------NLVRADLLCSINQES-VDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAVT-----VGMLYLLVIEANRPKEVLARLEERGYGTRILKVRKILGETVYIIKGEKS
General information:
TITO was launched using:
RESULT:
Template:
3Q87.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70782 for 1189 contacts (-59.5/contact) +
2D Compatibility (PS) -15886 + (NN) -2679 + (LL) 2764
1D Compatibility (HY) -10400 + (ID) 1800
Total energy: -98783.0 ( -83.08 by residue)
QMean score : 0.571
(partial model without unconserved sides chains):
PDB file :
Tito_3Q87.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q87-query.scw
PDB file :
Tito_Scwrl_3Q87.pdb
: