Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQVQYYGTGRRKSSVARVRLVPGEGRIVVNNREISEHIPSAALIEDIKQPLTLTETAGTYDVLVNVHGGGLSGQAGAIRHGIARALLEADPEYRTTLKRAGLLTRDARMKERKKYGLKGARRAPQFSKR
1FJG Chain:I ((2-128))
---EQYYGTGRRKEAVARVFLRPGNGKVTVNGQDFNEYFQGLVRAVAALEPLRAVDALGRFDAYITVRGGGKSGQIDAIKLGIARALVQYNPDYRAKLKPLGFLTRDARVVERKKYGKHKARRAPQYSKR
General information:
TITO was launched using:
RESULT:
Template:
1FJG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52320 for 935 contacts (-56.0/contact) +
2D Compatibility (PS) -13072 + (NN) -2469 + (LL) 472
1D Compatibility (HY) -6000 + (ID) 3300
Total energy: -76689.0 ( -82.02 by residue)
QMean score : 0.587
(partial model without unconserved sides chains):
PDB file :
Tito_1FJG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FJG-query.scw
PDB file :
Tito_Scwrl_1FJG.pdb
: