Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSQLFKSFDA-SEKTQLICFPFAGGYSASFRPLHAFLQGECEMLAAEPPGHGTNQ-TSAIEDLEELTDLYKQELNLRPDRPFVLFGHSMGGMITFRLAQK-LEREGIFPQAVIISAIQPPHIQR---KKVSHLPD----DQ-FLDHIIQL-GGMPAELVENKEVMSFFLP----SFRSDYR-ALEQFE----L-YDLA--QIQSPVHVFNGLDDKK-CIRDAEGWKKWAKDITFHQFDG-GHMFLLSQTEEVAERIFAILNQHPIIQP
4CFS Chain:A ((29-285))----YIDNQRDTDGPAILLLPGWCHDHRVYKYLIQELDADFRVIVPNWRGHGLSPSEVPDFGYQEQVKDALEILDQLGVETFLPVSHSHGGWVLVELLEQAGPE---RAPRGIIMDWLMWAPKPDFAKSLTLLKDPERWREGTHGLFDVWLDGHDEKRVR-HHLLEEMADYGYDCWGRSGRVIEDAYGRNGSPMQMMANLTKTRPIRHIFSQPTEPEYEKINSDFAEQHPWFSYAKLGGPTAFPAIDVPDRAAVHIREFATAIRQ---


General information:
TITO was launched using:
RESULT:

Template: 4CFS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1205 -140722 -116.78 -609.19
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -116.78
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.510

(partial model without unconserved sides chains):
PDB file : Tito_4CFS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4CFS-query.scw
PDB file : Tito_Scwrl_4CFS.pdb: