Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIPLHENLAGKTAVITGGSGVLCSAMARELARHGMKVAILNRTAEKGQAVVKEITAAGGTACAVAADVLDRMSLERAKEDILGQFGAVDLLINGAGGNHPDAITDVETYEEAGEGQSFFDMDERGFLTVFSTNFTGAFLASQVFGKELLKA-DSPAIINLSSMSAYSPMTKVPAYSAAKASINNFTMWMAVHFAETGLRVNAIAPGFFLTKQNHDLLINQDGTFTSRSHKIIAGTPMKRFGKPEDLLGTLLWLADESYSGFVTGITVPVDGGFMAYSGV
4G81 Chain:D ((4-255))----LFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQY---------------RKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDK-----QFDSWVKSSTPSQRWGRPEELIGTAIFLSSKASD-YINGQIIYVDGGWLAVL--


General information:
TITO was launched using:
RESULT:

Template: 4G81.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1361 -129521 -95.17 -516.02
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain D : 0.77

3D Compatibility (PKB) : -95.17
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.600

(partial model without unconserved sides chains):
PDB file : Tito_4G81.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4G81-query.scw
PDB file : Tito_Scwrl_4G81.pdb: