Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----------------MALVRPFPIVQVVGFQNSGKTTFIERILEKASEQGVHLGCLKHHGHGGEPQTLTEGKDTDRYKAAGADVTAVEGAGVLQLTARRNWDLARLIELYQFLETDCLLIEGFKKAPYPK---------VVILSEKED-------LEALQAVNIIAI---IYRKKEHMTEHQGLPVFHADDPVAVDFVLSQLKGESA---------------
2HF9 Chain:A ((16-226))KDILKANKRLADKNRKLLNKHGVVAFDFMGAIGSGKTLLIEKLIDNLKDK-YKIACIAGD--------VIAKFDAERMEKHGAKVVPLNTGKECHLDAHL---VGHALEDLNLDEIDLLFIENVGNLICPADFDLGTHKRIVVISTTEGDDTIEKHPGIMKTADLIVINKIDLADAVGADIKKMENDAKRINPDAEVVLLSLKTMEGFDKVLEFIEKSVKEVK


General information:
TITO was launched using:
RESULT:

Template: 2HF9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 785 -113034 -143.99 -702.07
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -143.99
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.360

(partial model without unconserved sides chains):
PDB file : Tito_2HF9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2HF9-query.scw
PDB file : Tito_Scwrl_2HF9.pdb: