Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPLISIDSRKHLFYEEYGQGIPIIFIHPPGMGRKVFYYQ-RLLS-KHFRVIFPDLSGHGDSDHIDQPASISYY--ANEIAQFMDALHIDKAVLFGYSAGGLIAQHIGFTRPDKVSHLILSGAYPAVHN---VIG---QKLHK-LG-MY--LL-EKNP---GLLMK-ILAG---SHTKDRQLRSILTDHMK-KADQ---AHWHQYYL-----DSL---GYNCIEQLPRLEMPMLFMYGGLRDWTFTNA-GYYRRSCRHAEFFRLEYQGHQLPTKQWKTCNELVTGFVLTHHS
3U1T Chain:A ((13-296))---TVEVEGATIAYVDEGSGQPVLFLHGNPTSSYLWRNIIPYVVAAGYRAVAPDLIGMGDSAKPDIE--YRLQDHVAYMDGFIDALGLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYEAMGPQLGPLFRDLRTADVGEKMVLDGNFFVETILPEMGVVRSLSEAEMAAYRAPFPTRQSRLPTLQWPREVPIGGEPAFAEAEVLKNGEWLMASPIPKLLFHAEPGALAPKPVVDYLSENVPNLEVRFVGAGTHFLQEDHPHLIGQGIADWLRRN--


General information:
TITO was launched using:
RESULT:

Template: 3U1T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1282 -39510 -30.82 -158.67
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -30.82
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.318

(partial model without unconserved sides chains):
PDB file : Tito_3U1T.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3U1T-query.scw
PDB file : Tito_Scwrl_3U1T.pdb: