Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAREISRQTFLRGAAGALAAGAVFGSVRATADPAASGWEALSSALGGKVLQPDDGPQFATAKQ--VFNTNYN---GYTPAVIVTPTSQLDVQKAMAFAAANNLKVAPRGGGHSYVGASTAN--GAMVLDLRQLPGDINYDATTGRVTVTPATGLYAMHQVLAAA--GRGIPTGTCPTVGVAGHALGGGLGANSRHAGLLCDQLTSASVVLPSGQAVTASATDHPDLFWALRGGGGGNFGVTTSLTFATFPSGDLD-VVNLNFPP--QSFAQVLVGWQNWLRTADRGSWALAD-ATV--DPLGTHCR--I--LATCPAGSGGSVAAAIVSAVGTQPTGTENHTFNYLDLVRYLAVGN----------LNPSPLGYVGGSDVF-TTITPATAQGIASAVDAFPRGAGRMLAIMHALDGALATVSPGATAFPWRRQS-ALVQWYVETS--GSPSEATSWLNTAHQAVRAYS----VGGYVNYLEVNQ----------------PPARYFGPNLSRLSAVRQKYDPSRVMFSGLNF |
3VTE Chain:A ((23-509)) | ----------------------------------------------KLVYTQHD-QLYMSILNSTIQNLRFISDTTPKPLVIVTPSNNSHIQATILCSKKVGLQIRTRSGGHDAEGMSYISQVPFVVVDLRNMHS-IKIDVHSQTAWVEAGATLGEVYYWINEKNENLSFPGGYCPTVGVGGHFSGGGYGALMRNYGLAADNIIDAHLVNVDGKVLDRKS-MGEDLFWAIRGGGGENFGIIAAWKIKLVAVPSKSTIFSVKKNMEIHGLVKLFNKWQNIAYKYDKDLVLMTHFITKNIT---TTVHGYFSSIFHGGVDSLVDLMNKSFP--ELGIKKTDCKEFSWIDTTIFYSGVVNFKKEILLDRSAGKKTAFSIKLDYVKKPIPETAMVKILEKLYEEDV--GAGMYVLYPYGGIMEEISESAIPFPHRAGIMYELWYTASWEKQEDNEKHINWVRSVYNFTTPYVSQNPRLAYLNYRDLDLGKTNHASPNNYTQARIWGEKYFGKNFNRLVKVKTKVDPNNFFRNEQS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VTE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -210261 for 3587 contacts (-58.6/contact) +
2D Compatibility (PS) -46484 + (NN) -20601 + (LL) 3344
1D Compatibility (HY) -23600 + (ID) 4750
Total energy: -302352.0 ( -84.29 by residue)
QMean score : 0.505
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