Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVR-NYEADLSA-----C-RIPLGDVLGPAGVAHVTA-EVTAIDADGRRVTTST-GASYSYDRLVLASGSHVVKPALPGLAE-FGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFARGDGVTPRVVLIDHNPFVGS-DMGLSARPVIEQALLDNGVETRTGVSVAAVSPGG---VTLSSGERLAAATVVWCAGMRAS-RLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDD-E-HLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERKVVSQGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAPRVQPRP |
| 4FX9 Chain:A ((6-318)) | KKKVVIIGGGAAGMSAASRVKRLK-------PEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKKRGIDLHLNAEVIEVDTGYVRVR--GGEKSYEWDYLVFANGASPQVPAIEGVNLKGVFTADLPPDALAIREYMEK-------YKVENVVIIGGGYIGIEMAEAFAAQG-----------KNVTMIVRGERVLRRSFDKEVTDILEEKLKK-HVNLRLQEITMKIEGEERVEKVVTDAGEYKAELVILATGIKPNIELAKQLGVRIGETGAIWTNEKMQT-SVENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAGSNIAGK----------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FX9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -216911 for 2439 contacts (-88.9/contact) +
2D Compatibility (PS) -31367 + (NN) -4758 + (LL) 6504
1D Compatibility (HY) -12000 + (ID) 3550
Total energy: -262082.0 ( -107.45 by residue)
QMean score : 0.413
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