Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRNRGFGRRELLVAMAMLVSVTGCARHASGARPASTTLPAGADLADRFAELERRYDARLGVYVPATGTTAAIEYRADERFAFCSTFKAPLVAAVLHQ--NPLTHLDKLITYTSDDIRSISPVAQQHVQTGMTIGQLCDAAIRYSDGTAANLLLADLGGPGGGTAAFTGYLRSLGDTVSRLDAEEPELNRDPPGDERDTTTPHAIALVLQQLVLGNALPPDKRALLTDWMARNTTGAKRIRAGFPADWKVIDKTGTGDYGRANDIAVVWSPTGVPYVVAVMSDRAGGGYDAEPREALLAEAATCVAGVLA |
| 4C6Y Chain:A ((2-259)) | -----------------------------------------AALSEQLAELEKRSGGRLGVAVLDTATGRRIAYRGDERFPMCSTFKALLAAAVLAQVDQGKERLDRRITYSKADLVDYSPVTEKHVGGGMTVAELCEAAITYSDNTAANLLLEALGGP----AALTAFLRSIGDEVTRLDRWEPELNEALPGDPRDTTTPRAMAATLRKLLLGDALSPASREQLVDWLLANKTGDKRLRAGLPADWRVGDKTGTGGHGTTNDIAVIWPPNRAPIVVAVYYTESQA--DAEARDAVIAEVGRLVA---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C6Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -121980 for 2294 contacts (-53.2/contact) +
2D Compatibility (PS) -28280 + (NN) -18866 + (LL) 2496
1D Compatibility (HY) -21600 + (ID) 7300
Total energy: -195530.0 ( -85.24 by residue)
QMean score : 0.557
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