Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTALNRAVASARVGTEVIRVRGLTFRYPKAAEPAVRGMEFTVGRGEIFGLLGPSGAGKSTTQKLLIGLLRDHGGQATV----WDKEPAEWGPDYYERIGVSFELPNHYQKLTGYENLRFFASLY----AGATADPMQLLAAVGLADDAHTLVGKYSKGMQMRLPFARSLINDPELLFLDEPTSGLDPVNARKIKDIIVDLKAR-GRTIFLTTHDMATADELCDRVAFVVDGRIVALDSPTELKIARSRRRV--------RVEYRGDGGGLETAEFGMDGLADDPAFHSVLRNHHVETIHSREASLDDVF---VEVTGRQLT--------------------------------------------- |
| 1OXS Chain:C ((1-352)) | MVR--------------IIVKNVSKVFKKGKVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVASNGKLIVPPEDRKIGMVFQTWALYPNLTAFENIAFPLTNMKMSKEEIRKRVEEVAKILDIHHVLNHFPRELSGGQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLYDNPVSIQVASLIGEINELEGKVTNEGVVIGSLRFPVSVSSDRAIIGIRPEDVKLSKDVIKDDSWILVGKGKVKVIGYQGGLFRITITPLDSEEEIFTYSDHPIHSGEEVLVYVRKDKIKVFEK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OXS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94805 for 2127 contacts (-44.6/contact) +
2D Compatibility (PS) -31092 + (NN) -12779 + (LL) 1260
1D Compatibility (HY) -16000 + (ID) 3450
Total energy: -156866.0 ( -73.75 by residue)
QMean score : ?
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