Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRIIGGVAGGRRIAVPPRGTRPTTDRVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLS--GATLRRGAVAAVVAAG--TTSPVDLVLADPPYNVDSA-------DVDAILAALGTNGWTREGTVAVVERATTCAPLTWPEGWRRWPQRVYGDTRLELAERLFANV
2B78 Chain:A ((212-335))
------------------------------------------AGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIIIDPPSF----EVFSVSKDYHKLIRQGLE--ILSENGLIIASTNAAN--------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2B78.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73977 for 810 contacts (-91.3/contact) +
2D Compatibility (PS) -11847 + (NN) -8815 + (LL) 4740
1D Compatibility (HY) -5200 + (ID) 1150
Total energy: -96249.0 ( -118.83 by residue)
QMean score : 0.676
(partial model without unconserved sides chains):
PDB file :
Tito_2B78.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B78-query.scw
PDB file :
Tito_Scwrl_2B78.pdb
: