Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSTSIPTFPFDRPVPTEPSPMLSELRNSCPVAPIELPSGHTAWLVTRFDDVKGVLSDKRFSCRAAAHPSSP-------PFVPFVQLCPSLLSIDGPQHTAARRLLAQGLNPGFIARMRPVVQQIVDNALDDLAA-AEPPVDFQEIVSVPIGEQLMA-KLLGVEPKTVHELAAHVDAAMSVCEIGDEEVSRRWSALCTMVIDILHRKLAEPGDDLLSTIAQANRQQSTMTDEQVVGMLLTVVIGGVDTPIAVITNGLASLLHHRDQYERLVEDPGRVARAVEEIVRFNPATEIEHLRVVTEDVVIAGTALSAGSPAFTSITSANRDSDQFLDPDEFDVERNPNEHIAFGYGPHACPASAYSRMCLTTFFTSLTQRFPQLQLARPFEDLERRGKGLHSVGIKELLVTWPT |
| 2Z36 Chain:A ((19-408)) | -------------GCPFAPPAAYERLRERAPINKVRLTSGGQAWWVSGHEEARAVLADGRFSSDKR-KDGFPLFTLDAATLQQLRSQPPLMLGMDGAEHSAARRPVIGEFTVKRLAALRPRIQDIVDHFIDDMLATDQRPVDLVQAL-SLPVPSLVICELLGVPYTDHDFFQSRTTMMVSR-T-SMEDRRRAFAELRAYIDDLITRKESEPGDDLFSRQIARQRQEGTLDHAGLVSLAFLLLTAGHETTANMISLGVVGLLSHPEQLTVVKANPGRTPMAVEELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLDVERGARHHLAFGFGPHQCLGQNLARMELQIVFDTLFRRIPSLRLAVPMEDVPFKG-DSVIYGVHELPVTWH- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2Z36.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -226135 for 3061 contacts (-73.9/contact) +
2D Compatibility (PS) -41031 + (NN) -22249 + (LL) 1012
1D Compatibility (HY) -21600 + (ID) 6400
Total energy: -316403.0 ( -103.37 by residue)
QMean score : 0.507
|
|
|