Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTGVSDIQEAVAQIKAAGPSKPRLARDPVNQPMINNWVEAIGDRNPIYVDDAAARAAGHPGIVAPPAMIQVWTMMGLGGVRPKDDPLGPIIKLFDDAGYIGVVATNCEQTYHRYLLPGEQVSISAELGDVVGPKQTALGEGWFINQHIVWQVGDEDVAEMNWRILKFKPAGSPSSVPDDLDPDAMMRPSSS---RDTAFFWDGVKAHELRIQRLADGSLRHP--------------PVPAVWQDKSVPINYVVSSGRGTVFSFVVHHAPKVPGRTVPFVIALVELEEGVRMLGELRGADPA-----RVAIGMPVRA----TYIDFPDWSLYAWEPDE--------------------------- |
| 4V12 Chain:A ((7-343)) | --DTSTLESRVGHYYQMEDTYL------VGREKVREFARAVQDYHPAHWNLATAADLGHPGLIAP------LTFTSAPAMACNQRMFESVVV-----GYDMYLQTEEVFEQHRPIVEGDELSIDIELTSVRRI-----AGRDLITVTNTFTDTAGEVVHTLHTTVVGITAEDVDPAIRPAVQGVMMHGINMLGVEETNAPYEKTVRPEGELRIAQGGATRTPTSLNFDDLKVGEELPVHTARLSRGDLVNYAGVAGDANPLHWD-ENIAKLAGQPDVIAHGMLTMGLGAGFVSSWSG-DPGAITRYAVRLSQPAVVPAEGTEIEYSG-RIKSLDPETRTGVVIVAAKSGGRKIFGLATATIRFS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4V12.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -70340 for 2168 contacts (-32.4/contact) +
2D Compatibility (PS) -29856 + (NN) -3711 + (LL) 2640
1D Compatibility (HY) -4000 + (ID) 2600
Total energy: -107867.0 ( -49.75 by residue)
QMean score : 0.239
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