Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVREAGEVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEARQILG-HRAMIVA-GGSNRTDTVNLALTVLSGT--AEPEFVLVHDAARALTPPALVARVVEALRDGYAAVVPVLPLSDTIKAVDANG-VVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLDLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVRG
4ZDQ Chain:A ((7-235))
----TSRLFALIPCAGTGSRSGSALPKQYRTLAGRALLHYTLAAFDACSEFAQTLVVISPDDAHFDARRFAGLRFAVRRCGGASRQASVMNGLIQLAEFGATDADWVLVHDAARPGITPALIRTLIGALKDDPVGGIVALPVADTLKRVPAGGDAIERTESRNGLWQAQTPQMFRIGMLRDAIQRAQL--EGRDLTDEASAIEWAGHTPRVVQGSLRNFKVTYPEDFDLAEAILA-
General information:
TITO was launched using:
RESULT:
Template:
4ZDQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -135912 for 1820 contacts (-74.7/contact) +
2D Compatibility (PS) -24743 + (NN) -11093 + (LL) 532
1D Compatibility (HY) -10400 + (ID) 3600
Total energy: -185216.0 ( -101.77 by residue)
QMean score : 0.352
(partial model without unconserved sides chains):
PDB file :
Tito_4ZDQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ZDQ-query.scw
PDB file :
Tito_Scwrl_4ZDQ.pdb
: