Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTPALVVGPAAWHAVHVTQSSSAITPGQTAELYPGDIKSVLLTAEQIQARIAELGEQIGNDYRELSATTGQD-LLLITVLKGAVLFVTDLARAIP---VPTQFEFMAVSSYGSSTSSSGVVRILKDLDRDIHGRDVLIVEDVVDSGLTLSWLSRNLTSRNPRSLRVCTLLRKPDAVHANVEIAYVGFDIPNDFVVGYGLDYDERYRDLSYIGTLDPRVYQ
1P18 Chain:B ((9-190))
-------------------------------------EKILFTEEEIRTRIKEVAKRIADDYKGKGLRPYVNPLVLISVLRGSFMFTADLCRALCDFNVPVRMEFICVSSYGEGLTSSGQVRMLLDTRHSIEGHHVLIVEDIVDTALTLNYLYHMYFTRRPASLKTVVLLDKREGRRVPFSADYVVANIPNAFVIGYGLDYDDTYRELRDIVVLRPEVY-
General information:
TITO was launched using:
RESULT:
Template:
1P18.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -165200 for 1402 contacts (-117.8/contact) +
2D Compatibility (PS) -19253 + (NN) -4989 + (LL) 2372
1D Compatibility (HY) -20400 + (ID) 4000
Total energy: -211470.0 ( -150.83 by residue)
QMean score : 0.641
(partial model without unconserved sides chains):
PDB file :
Tito_1P18.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P18-query.scw
PDB file :
Tito_Scwrl_1P18.pdb
: