Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTPSQWLDIAVLAVAFIAAISGWRAGALGSMLSFGGVLLGATAGVLLAPHIVSQISAPRAKLFAALFLILALVVVGEVAGVVLGRAVRGAIRNRPIRLIDSVIGVGVQLVVVLTAAWLLAMPLTQSKEQPELAAAVKGSRVLARVNEAAPTWLKTVPKRLSALLNTSGLPAVLEPFSRTPVIPVASPDPALVNNPVVAATEPSVVKIRSLAPR----------CQKVLEGTGFVISPDRVMTNAHVVAGSNNVTVYAG--DKPFEATVVSYDPSVDVAILAVPHL----PPPPLVFAAEPAKTGADVVVLGYPGGGN-FTATPARIREAIRLSGPDIYGDPEPVTRDVYTIRADVEQGDSGGPLIDLNGQVLGVVFGAAIDDAETGFVLTAGEVAGQLAKIGATQPVGTGACVS |
| 4FLN Chain:A ((44-244)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASFLNAVVKVYCTHTAPDYSLPWQKQRQFTSTGSAFMIGDGKLLTNAHCVEHDTQVKVKRRGDDRKYVAKVLVRGVDCDIALLSVESEDFWKGAEPLRLGH-LPRLQDSVTVVGYPLGGDTISVTKGVVSRIEVTS----YAHG-SSDLLGIQIDAAINPGNSGGPAFNDQGECIGVAFQVY---ENIGYVIPTTVVSHFLTDYE------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FLN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97672 for 1495 contacts (-65.3/contact) +
2D Compatibility (PS) -20154 + (NN) -8852 + (LL) 16940
1D Compatibility (HY) -10800 + (ID) 2450
Total energy: -122988.0 ( -82.27 by residue)
QMean score : 0.473
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