Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVAITHTPKLKHLDKLLAHCHRRRYTAKSTIIYAGDRCETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFGELGLFEKEGSEQERSAWVRAKVECEVAEISYAKFRELSQQDSEILYTLGSQMADRLRKTTRKVGDLAFLDVTGRVARTLLDLCQQPDAMTHPDGMQIKITRQEIGRIVGCSREMVGRVLKSLEEQGLVHVKGKTMVVFGTR
1HW5 Chain:A ((12-209))
------------LEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFE-EG--QERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQVLAEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVVYGT-
General information:
TITO was launched using:
RESULT:
Template:
1HW5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -132373 for 1443 contacts (-91.7/contact) +
2D Compatibility (PS) -21364 + (NN) -4965 + (LL) 1344
1D Compatibility (HY) -24400 + (ID) 6650
Total energy: -188408.0 ( -130.57 by residue)
QMean score : 0.573
(partial model without unconserved sides chains):
PDB file :
Tito_1HW5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HW5-query.scw
PDB file :
Tito_Scwrl_1HW5.pdb
: