Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDNDDRIKLEASWKEALREEFDKPYMKQLGEFLRQEKAAGKVIFPPGPLIFNALNTTPLENVKVVIIGQDPYHGPGQAHGLCFSVQPGVPTPPSLQNIYKELNRDL-NIPIPNNGYLQRWAEQGVLLLNTSLTVEQAKAGSHANAGWQPFTDRVIEVVNERCERLVFLLWGSHAQSKQKLIDPQRHLILKSAHPSPLSAYRGFLGNGHFSRTNKFLEQNGKTPIDWSLPDL-
1UUG Chain:A ((5-226))
-----------LTWHDVLAEEKQQPYFLNTLQTVASERQSGVTIYPPQKDVFNAFRFTELGDVKVVILGQDPYHGPGQAHGLAFSVRPGIAIPPSLLNMYKELENTIPGFTRPNHGYLESWARQGVLLLNTVLTVRAGQAHSHASLGWETFTDKVISLINQHREGVVFLLWGSHAQKKGAIIDKQRHHVLKAPHPSPLSAHRGFFGCNHFVLANQWLEQRGETPIDWMPVLPA
General information:
TITO was launched using:
RESULT:
Template:
1UUG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89655 for 1720 contacts (-52.1/contact) +
2D Compatibility (PS) -23945 + (NN) -14394 + (LL) 600
1D Compatibility (HY) -19200 + (ID) 6050
Total energy: -152644.0 ( -88.75 by residue)
QMean score : 0.571
(partial model without unconserved sides chains):
PDB file :
Tito_1UUG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UUG-query.scw
PDB file :
Tito_Scwrl_1UUG.pdb
: