Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKLLPLAVLAALSSVHVASAQAADVSAAVGATGQSGMTYRLGLSWDWDKSWWQTSTGRLTGYWDAGYTYWEGGDEGAGKHSLSFAPVFVYEFA-GDSIKPFIEAGIGVAAFSGTRVG----DQNLGSSLNFEDRIGAGLK----FANGQSVGVRAIHYSNAGLKQPNDGIESYSLFYKIPI |
| 2JMM Chain:A ((22-150)) | -----------------------------------NQLGAGAFGGYQVNPYVG----------FEMGYDWLGRMPR--KAQGVQLTAKLGYPKLGTDDLDIYTRLGGMVWRADTSDKDGNGYISAAEASVSPVFAGGVEYVIRRRITPEIATRLEYQWTNNA------SDNGMLSLGVSYRF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JMM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1808 for 728 contacts (-2.5/contact) +
2D Compatibility (PS) -12624 + (NN) -1121 + (LL) 3492
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -14661.0 ( -20.14 by residue)
QMean score : 0.112
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