Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQRSLLFALLATLLLVGGARAETDPDYSMVLLTE-NFPPYNMAINGKNFAQEDNIDGIAVDIVREMFKRA-------GIKYSLTLRFPWDRIYKLALEKPGYGVFV-TARLAEREDKFKWVGPIGPDDWVLLAKGDSPITLGSLDEAKKYRIGAYKGDAIAEFLGKNG----FE-ADLAL-RDQENAQKLVKGQIDLWASGDPAGRYLAKQEGV-TGLKTVL-RFNSDQLYLALNRETPDEVVQKLQAALDGMRKEGFVEDILNSYL |
| 2VHA Chain:A ((8-247)) | -----------------STLDKIAKNGVIVVGHRESSVPFSYYD------NQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVKLIP-ITSQNRIPLLQNGTFDFECGSTTNNVERQKQAAFSDTIFVVGTRLLTKKGGD--IKDFADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWDIVGKPQSQEAYGCMLRKD-DPQFKKLMDDTIAQVQTSGEAEKWFDKWF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VHA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104467 for 1839 contacts (-56.8/contact) +
2D Compatibility (PS) -24473 + (NN) -11406 + (LL) 2540
1D Compatibility (HY) -3600 + (ID) 1200
Total energy: -142606.0 ( -77.55 by residue)
QMean score : 0.501
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