Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQKVESIIIGGGPCGLSAAIEQKRKG--IDTLIIEKGNVVESIYNYPTHQTFFSSSDKLSIGDVPFIVEESKPRRNQA-LVYYREVVKHHQLKVNAFEEVLTVKKMNNKFTITTTKDVYECRFLTIATGYYGQHNTLEVEGADLPKVFH--YFKEAH-----PYFDQDVVIIGGKNSAIDAALELEKAGANVTVLYRGGDYSPS-IKPWILPNFTALVNHEKIDMEFNANVTQITEDT--VTYEVNGESKTIHNDYVFAMIGYHPDYEFLKSVGIQINTNEFGTAPMYNKETYETNIENCYIAGVIAAGNDANTIFIENGKFHGGIIAQNMLAKKQTPLES |
| 2V3A Chain:A ((4-306)) | --RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADDG--RSYSKPMLSTGF--------SKNK--------DADGLAMAEPGAMAEQLNARILTHTRVTGIDPGHQ--RIWIGEEEVRYRDLVLAWGAE--PIRVPVEGDAQDALYPINDLEDYARFRQAAAGKRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSD-GEVIPCDLVVSAVGLRPRTELAFAAGLAVN----RG-IVVD-RSLRTSHANIYALGDCAEVDGLNLLYVMPLMACARALAQTLAGN------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V3A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -184527 for 2402 contacts (-76.8/contact) +
2D Compatibility (PS) -30736 + (NN) -6250 + (LL) 2524
1D Compatibility (HY) -8800 + (ID) 2350
Total energy: -230139.0 ( -95.81 by residue)
QMean score : 0.421
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