Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LAEGLRTIYFVRHGKTEWNMTGQMQGWGDSPLVAEGIDGAKAVGEVLKD--MQIDAVYTSTSKRTQDTAAYILGDR---EIEIQPLEELKEMGFGTWEGIRVTEIDEKHPEERAKILHSPETY--------------------------K-AEVNGGETYYELAERLLEGVEKIIAD--NPNGNILVVSHGMSLTLLLYL-LQGGTIEDHRKEAPRILNTSISIVEYQNGE-FSLKK-INEIGHLDLK |
| 3KKK Chain:A ((2-231)) | ---TTYTLVLLRHGESTWNKENKFTGWTDVPLSEKGEEEAIAAGKYLKEKNFKFDVVYTSVLKRAICTAWNVLKTADLLHVPVVKTWRLNERHCGSLQGLNKSETAKKYGEEQ----VKIWRRSYDIPPPKLDKEDNRWPGHNVVYKNVPKDALPFTECLKDTVERVLPFWFDHIAPDILANKKVMVAAHGNSLRGLVKHLDNLSEADVLE--L-NIPTGVPLVYELDENLKPIKHYYLL-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KKK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -62494 for 1511 contacts (-41.4/contact) +
2D Compatibility (PS) -20935 + (NN) -4840 + (LL) 1560
1D Compatibility (HY) -5600 + (ID) 2500
Total energy: -94809.0 ( -62.75 by residue)
QMean score : 0.459
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