Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNLDILYCKLAMCTTLLTERLRLQPVDLSNINDFLE----FSSDSETVFYMQRYKANTTEEAQMVLANVC-----M--KSPLGIYAMIETESNKMIGIIELEIRD---EFSAEFGYILNKNYSGKGYMTEACSKLMSVGFEYLDLERIYARFDINNKKSGNVMERLGMKKEGELRHLAKNPKGEWKTRAYYSILKEEYFNKVNTK
2VZY Chain:A ((10-195))
--------------LRITTPRLQLQLPTEELCDQLIDTILE------------------EDLPFNTLSHLWQQLAGFKRDDWSLPLAVL--VDGRAVGVQALSSKDFPITRQVDSGSWLGLRYQGHGYGTEMRAAVLYFAFAELEAQVATSRSFVDNPASIAVSRRNGYRDNGLDRVA-R--EGAMAEALLFRLTRDDWQRHRTVE
General information:
TITO was launched using:
RESULT:
Template:
2VZY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87470 for 1095 contacts (-79.9/contact) +
2D Compatibility (PS) -16160 + (NN) -920 + (LL) 2700
1D Compatibility (HY) -2400 + (ID) 1450
Total energy: -105700.0 ( -96.53 by residue)
QMean score : 0.386
(partial model without unconserved sides chains):
PDB file :
Tito_2VZY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2VZY-query.scw
PDB file :
Tito_Scwrl_2VZY.pdb
: